Stem-loop mtr-MIR5743b

Accession

MI0019667

Description

Medicago truncatula mtr-MIR5743b precursor miRNA

Sequence

uuuuuuuggaUGAGAACUGUUUUCCGCACCUUuggcuauaaaaacaaacaaaggugggaaaacauuucucaucuaaacaau
....((((((((((((.((((((((.((((((((..............)))))))))))))))).))))))))))))....

Structure

uuuu            C        G        gcuaua 
    uuuggaUGAGAA UGUUUUCC CACCUUug      a
    |||||||||||| |||||||| ||||||||       
    aaaucuacucuu acaaaagg guggaaac      a
uaac            u        -        aaacaa 

Annotation confidence Not enough data

Genome context

chr1: 8438755-8438835 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR5743b

Mature mtr-miR5743b

• Accession: MIMAT0023122
• Description: Medicago truncatula mtr-miR5743b mature miRNA
• Sequence: 11 - UGAGAACUGUUUUCCGCACCUU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553