Stem-loop mtr-MIR5741b

Accession

MI0019668

Description

Medicago truncatula mtr-MIR5741b precursor miRNA

Sequence

aaagauuaaauaauucaucaaacuaguccauagacuaucauucucucccccauaguuuaaggacuaaauuggacagauaauuggagagaaugauaguuUAGGGACUAAAUUGAUGGUUUauucaucaau
...(((..(((((.(((((((..((((((.((((((((((((((((((......((((((........))))))........)))))))))))))))))).))))))..))))))).))))).)))...

Structure

aaa   ua     u       ac      a                  --cccaua      gga 
   gau  aauaa ucaucaa  uagucc uagacuaucauucucucc        guuuaa   c
   |||  ||||| |||||||  |||||| ||||||||||||||||||        ||||||    
   cua  uuaUU GGUAGUU  AUCAGG AUuugauaguaagagagg        cagguu   u
uaa   -c     U       AA      G                  uuaauaga      aaa 

Annotation confidence Low

Genome context

chr2: 5612749-5612877 [+]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553