We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
Want the script? Email us or visit Downloads or something.
ug u aa caca -- - ---uu au
uuugcuu uaag cuuuuaau uuuguu uuucu uc cuc a
||||||| |||| |||||||| |||||| ||||| || |||
gaacgga AUUC GAAGGUUA AAACAg gaaga ag gag u
cg u -G -CAG cu u ccucu au