Stem-loop mtr-MIR5748

Accession

MI0019673

Description

Medicago truncatula mtr-MIR5748 precursor miRNA

Sequence

uguuugcuuuuaagaacuuuuaaucacauuuguuuuucuucuucucauauuagagucuccgauagaagucgACAAAGACAUUGGAAGGCUUAuaggcaaggc
..(((((((.((((..((((((((....(((((((((((((..(((......))).....)).)))))..))))))...)))))))).)))).)))))))..

Structure

ug       u    aa        caca      --     -  ---uu   au 
  uuugcuu uaag  cuuuuaau    uuuguu  uuucu uc     cuc  a
  ||||||| ||||  ||||||||    ||||||  ||||| ||     |||   
  gaacgga AUUC  GAAGGUUA    AAACAg  gaaga ag     gag  u
cg       u    -G        -CAG      cu     u  ccucu   au 

Annotation confidence Not enough data

Genome context

chr3: 3472490-3472591 [+]

Mature mtr-miR5748

• Accession: MIMAT0023128
• Description: Medicago truncatula mtr-miR5748 mature miRNA
• Sequence: 72 - ACAAAGACAUUGGAAGGCUUA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553