Stem-loop mtr-MIR5751

Accession

MI0019676

Description

Medicago truncatula mtr-MIR5751 precursor miRNA

Sequence

caaauaauguauugccauccgaucaaauuaaggguccagauucauuuucucuaauuuuccacuuucaucccaaaacacaggagguuauggaaaaggcaaaaccaccuucaauuuuuaauaugaaaagggaggcuuucaauuuuuaauaccccguguuguaggcugaaaguggaaaauuaaagaagguaaauuaggacccUUGAUUUGAUCAGAUGGUUUUguauuguuua
.((((((((((..((((((.(((((((((((((((((.((((.(((((((.((((((((((((((((.((...(((((.((.(((..((((((..(.(((.((.((((...((((......)))))))).)).))))..))))))..))))))))))...)).)))))))))))))))).))))))).)))).))))))))))))))))).))))))..)))))))))).

Structure

c          uu      c                 a    c       c                u  caa     a  a   ua      ag c   a  a    caa    ua 
 aaauaaugua  gccauc gaucaaauuaagggucc gauu auuuucu uaauuuuccacuuuca cc   aacac gg ggu  uggaaa  g aaa cc ccuu   uuuu  a
 ||||||||||  |||||| ||||||||||||||||| |||| ||||||| |||||||||||||||| ||   ||||| || |||  ||||||  | ||| || ||||   ||||   
 uuuguuaugU  UGGUAG CUAGUUUAGUUcccagg uuaa uggaaga auuaaaaggugaaagu gg   uugug cc cca  auuuuu  c uuu gg ggga   aaag  u
a          UU      A                 a    a       a                c  aug     -  -   ua      aa -   c  a    ---    ua 

Annotation confidence Not enough data

Genome context

chr3: 10919715-10919944 [-]

Mature mtr-miR5751

• Accession: MIMAT0023131
• Description: Medicago truncatula mtr-miR5751 mature miRNA
• Sequence: 200 - UUGAUUUGAUCAGAUGGUUUU - 220
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553