Stem-loop mtr-MIR5753

Accession

MI0019680

Description

Medicago truncatula mtr-MIR5753 precursor miRNA

Sequence

644 reads, 8.0 reads per million, 105 experiments

caacucuuauguugAGUUGACACCAAUCAAAAUCAuucauuuauuauuuacuauaguaaauaauaauugaaugAUUUUGAUUGGUGCCAACUAAacacgaguaa
..((((...((((.(((((.(((((((((((((((((((.(((((((((((....))))))))))).))))))))))))))))))).))))).)))).))))..

Structure

ca    uua    g     A                   u           u 
  acuc   uguu AGUUG CACCAAUCAAAAUCAuuca uuauuauuuac a
  ||||   |||| ||||| ||||||||||||||||||| |||||||||||  
  ugag   acaA UCAAC GUGGUUAGUUUUAguaagu aauaauaaaug u
aa    --c    A     C                   u           a 

Annotation confidence Medium

Genome context

chr4: 4555782-4555885 [-]

Mature mtr-miR5753-5p

• Accession: MIMAT0055249
• Description: Medicago truncatula mtr-miR5753-5p mature miRNA
• Sequence: 15 - AGUUGACACCAAUCAAAAUCA - 35
• Evidence: experimental ; unknown

Mature mtr-miR5753-3p

• Accession: MIMAT0023135
• Description: Medicago truncatula mtr-miR5753-3p mature miRNA
• Sequence: 74 - AUUUUGAUUGGUGCCAACUAA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553