Stem-loop mtr-MIR5759

Accession

MI0019691

Description

Medicago truncatula mtr-MIR5759 precursor miRNA

Sequence

auaauuucugAAGGGGGUGAAAAGAUUCAAAuaaucgguuaagugugugguggucaucuuagcuucuacauuauccaacaauaauuguguaaguaguaugucuaagauagcagcccucacaaucuaaugucuauugaaucuuuucuucccauuucaaaaguugua
(((((((.(((((((((.((((((((((((.((..((......((((.(((.((.((((((((..((((.((((.(((......))).))))))))...).))))))).)).)))..))))......))..)))))))))))))).)))).))))).))))))).

Structure

-       c     -    U            A  au  guuaag    -u   g  c       - -uu    a    c   ca 
 auaauuu ugAAG GGGG GAAAAGAUUCAA ua  cg      ugug  ggu gu aucuuag c   cuac uuau caa  a
 ||||||| ||||| |||| |||||||||||| ||  ||      ||||  ||| || ||||||| |   |||| |||| |||   
 uguugaa acuuu cccu cuuuucuaaguu au  gu      acac  ccg cg uagaauc g   gaug aaug guu  u
a       a     a    u            -  cu  aaucua    uc   a  a       u uau    -    u   aa 

Annotation confidence Not enough data

Genome context

chr7: 27924451-27924615 [+]

Mature mtr-miR5759

• Accession: MIMAT0023146
• Description: Medicago truncatula mtr-miR5759 mature miRNA
• Sequence: 11 - AAGGGGGUGAAAAGAUUCAAA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553