Stem-loop mtr-MIR5037a

Accession

MI0019695

Description

Medicago truncatula mtr-MIR5037a precursor miRNA

Sequence

agcauugaguAACCCUCAAAGGCUUCCACGGcaccaaguuacauguaaaugugaagucguggaagugcuuuuuggguuucucaaguc
.((.(((((.(((((..(((((((((((((((......((((((....)))))).))))))))))).))))..))))).))))))).

Structure

a  a     u     UC    -           accaag      g 
 gc uugag AACCC  AAAG GCUUCCACGGc      uuacau u
 || ||||| |||||  |||| |||||||||||      ||||||  
 ug aacuc uuggg  uuuc ugaaggugcug      agugua a
c  -     u     uu    g           -----a      a 

Annotation confidence Not enough data

Genome context

chr7: 23948126-23948212 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR5037a

Mature mtr-miR5037a

• Accession: MIMAT0023150
• Description: Medicago truncatula mtr-miR5037a mature miRNA
• Sequence: 11 - AACCCUCAAAGGCUUCCACGG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553