miRBase entry: mtr-MIR5037a

Stem-loop mtr-MIR5037a


Accession
MI0019695
Description
Medicago truncatula mtr-MIR5037a precursor miRNA


Sequence


agcauugaguAACCCUCAAAGGCUUCCACGGcaccaaguuacauguaaaugugaagucguggaagugcuuuuuggguuucucaaguc
.((.(((((.(((((..(((((((((((((((......((((((....)))))).))))))))))).))))..))))).))))))).

Structure
a  a     u     UC    -           accaag      g 
 gc uugag AACCC  AAAG GCUUCCACGGc      uuacau u
 || ||||| |||||  |||| |||||||||||      ||||||  
 ug aacuc uuggg  uuuc ugaaggugcug      agugua a
c  -     u     uu    g           -----a      a 


Annotation confidence Low
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Genome context
chr7: 23948126-23948212 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR5037a
Name Accession Chromosome Start End Strand Confidence




Database links


References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553