Stem-loop gma-MIR5763a

Accession

MI0019704

Description

Glycine max gma-MIR5763a precursor miRNA

Sequence

14085 reads, 48.0 reads per million, 171 experiments

gguuauggucuaaCCCGUCUUAGUAUAGUUCACUUucuacgacgguuauacauguaaccguauuagaaagUGAACUAUACAAAGACGGUUAuuccaaaaac
.....(((..(((((.(((((.(((((((((((((((((..((((((((....))))))))..))))))))))))))))).))))))))))..))).....

Structure

gguua   uc     C     A                 cg        a 
     ugg  uaaCC GUCUU GUAUAGUUCACUUucua  acgguuau c
     |||  ||||| ||||| |||||||||||||||||  ||||||||  
     acc  AUUGG CAGAA CAUAUCAAGUgaaagau  ugccaaug a
caaaa   uu     -     A                 ua        u 

Annotation confidence High

Genome context

chr13: 36443341-36443441 [-]

Mature gma-miR5763a-5p

• Accession: MIMAT0054281
• Description: Glycine max gma-miR5763a-5p mature miRNA
• Sequence: 14 - CCCGUCUUAGUAUAGUUCACUU - 35
• Evidence: experimental ; unknown

Mature gma-miR5763a-3p

• Accession: MIMAT0023159
• Description: Glycine max gma-miR5763a-3p mature miRNA
• Sequence: 71 - UGAACUAUACAAAGACGGUUA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553