Stem-loop gma-MIR5768

Accession

MI0019710

Description

Glycine max gma-MIR5768 precursor miRNA

Sequence

3940 reads, 14.0 reads per million, 174 experiments

cuggaaAGACUAUUCUGGAUUCAAAUUGUUacuuuuagaauagauuuuucguAAGUGCAAUACUGAUCUUCGGAACccccuuucua
.(((((((....(((((((.(((.(((((.((((...(((.......)))..)))))))))..)))..)))))))....)))))))

Structure

c       ACUA       -U   -A     U    uua   ua 
 uggaaAG    UUCUGGA  UCA  AUUGU acuu   gaa  g
 |||||||    |||||||  |||  ||||| ||||   |||  a
 aucuuuc    AAGGCUU  AGU  UAACG UGAA   cuu  u
-       cccC       CU   CA     -    -ug   uu 

Annotation confidence Low

Genome context

chr17: 8459044-8459129 [-]

Mature gma-miR5768-5p

• Accession: MIMAT0054286
• Description: Glycine max gma-miR5768-5p mature miRNA
• Sequence: 7 - AGACUAUUCUGGAUUCAAAUUGUU - 30
• Evidence: experimental ; unknown

Mature gma-miR5768-3p

• Accession: MIMAT0023165
• Description: Glycine max gma-miR5768-3p mature miRNA
• Sequence: 53 - AAGUGCAAUACUGAUCUUCGGAAC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553