miRBase entry: gma-MIR5769

Dead hairpin entry

Stem-loop gma-MIR5769


Accession
MI0019711
Description
Glycine max gma-MIR5769 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
1 open access papers mention gma-MIR5769
(1 sentences)

Sequence

18519 reads, 105.0 reads per million, 177 experiments
uuuaucuccuucgucggcaucauugacuugacauauuugcauauagaguauuguacaggauuaaaaaaauaaauuuaauggcauuuucaacggccaaaagcaugauucaacuuaagaccaugaagggaauauaaugugaUGAGGGAAAUGAAGACGACGAaguagucaaa
.....((.((((((((.(.(((((..(((.(((((((........((((..(((.....((((((........))))))(((..........)))....)))..)))).........((.....))......)))))).).)))..))))).).)))))))).)).....

Structure
uuuau  c        g a     ga   g -      ----------------ugcauaua    au   ---------------acagg      aaa 
     cu cuucgucg c ucauu  cuu a cauauu                        gagu  ugu                    auuaaa   a
     || |||||||| | |||||  ||| | ||||||                        ||||  |||                    ||||||    
     ga gaAGCAGC G AGUAA  GGA U guguaa                        cuua  acg                    uaauuu   u
aaacu  u        A A     AG   G a      uauaagggaaguaccagaauucaa    gu   aaaaccggcaacuuuuacgg      aaa