miRBase entry: gma-MIR5774a

Dead hairpin entry

Stem-loop gma-MIR5774a


Accession
MI0019721
Description
Glycine max gma-MIR5774a precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

1738 reads, 8.0 reads per million, 165 experiments
acgaguuugaGCUGGCGUCGACACGUGGCAUgggacuagucaguuaaacuggcgauuuguaaguagcagggcuccucagcuuuuucaggguugcaGCUCAGCUUUUUCAGGGUUGuaggcacgcgugaaggcagcaggagcagcacuuga
.((((((((..((.(((((..((((((((.((.((((.((((((...))))))...(((.(((.(((.(((((...(((((((...))))))).))))).))).)))))))))).)).)).))))))..))).)).))..))).))))).

Structure
a     -   aG  G  -   GA      -  A  g    agucaguuaaacuggcgau   u   u   a     ccu       u 
 cgagu uug  CU GC GUC  CACGUG GC Ug gacu                   uug aag agc gggcu   cagcuuu  
 ||||| |||  || || |||  |||||| || || ||||                   ||| ||| ||| |||||   ||||||| u
 guuca gac  gg cg cgg  gugcgc cg au UUGG                   GAC UUU UCG CUCGa   guuggga  
a     c   ga  a  a   aa      a  g  G    -------------------   -   U   A     --c       c