Stem-loop gma-MIR5775

Accession

MI0019724

Description

Glycine max gma-MIR5775 precursor miRNA

Sequence

aaauucuggaaguagucuuuccuuuuugguaaacuacacuuucccucuucaaaaguucuuauggaaaagacacauaaagaugucuguuugcauacaagccAUAAGCUCUUUUGAGAGCUUCucuagaguau
..((((((((.(((((....((.....))...))))).......((((.((((((..(((((((...(((((........))))).............)))))))..))))))))))....))))))))..

Structure

aa        aguagucuuuccuuuuugguaaacuacacuuucc    u      uu       ----------aaa     cau 
  auucugga                                  cucu caaaag  cuuaugg             agaca   a
  ||||||||                                  |||| ||||||  |||||||             |||||    
  ugagaucu                                  GAGA GUUUUC  GAAUAcc             ucugu   a
ua        ------------------------------CUUC    -      UC       gaacauacguuug     aga 

Annotation confidence Not enough data

Genome context

chr4: 9837427-9837557 [-]

Mature gma-miR5775

• Accession: MIMAT0023179
• Description: Glycine max gma-miR5775 mature miRNA
• Sequence: 101 - AUAAGCUCUUUUGAGAGCUUC - 121
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553