miRBase entry: gma-MIR5777

Dead hairpin entry

Stem-loop gma-MIR5777


Accession
MI0019727
Description
Glycine max gma-MIR5777 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

6711 reads, 39.0 reads per million, 176 experiments
gcugaugcuaggugcaccagcauuauugcuggugcauccagcacuuaaagagaaaagACUAAAAUAUCUCUGAUUCAUAAGucuuuuacggaucaaaugcuuaauaucaacauacgaaucaacuuaauuuauauuaaucuuacggaucaacucgauccauacaauuuacggaucacucucacgcacaccuagcacaaaugugaagaaaguguaCUAGCAAUAAUGUUGGAUGCACcuagcaucag
.((((((((((((((((((((((((((((((((((((..((((........(((((((((.....(((...))).....)))))))).)........))))......................(((((....)))))......(((((.....)))))..............((((......((.......))......)))).....))))))))))))))))))))).)))))))))))))))

Structure
g               -                     ---------------------------------------------------------------------------------------------------------cc    cuuaaaga -        AAAAU   U 
 cugaugcuaggugca ccagcauuauugcuggugcau                                                                                                           agca        g aaaagACU     AUC  
 ||||||||||||||| |||||||||||||||||||||                                                                                                           ||||        | ||||||||     ||| C
 gacuacgaucCACGU GGUUGUAAUAACGAUCaugug                                                                                                           ucgu        c uuuucuGA     UAG  
-               A                     aaagaaguguaaacacgauccacacgcacucucacuaggcauuuaacauaccuagcucaacuaggcauucuaauuauauuuaauucaacuaagcauacaacuauaau    aaacuagg a        AUACU   U