Dead hairpin entry

Stem-loop gma-MIR5774b

Accession

MI0019738

Description

Glycine max gma-MIR5774b precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention gma-MIR5774b
(2 sentences)

Sequence

2782 reads, 12.0 reads per million, 152 experiments

aagaguuuggGCUGGCGUCGACACGUGGCAUgagacuagucaguggcaauuugcagguagcagggcuucucagcuuuuucaggguagcaggguuacugcaaaucgccaauuggacuggcuagucucAUGUCACGUGUCGACGUCAGCCcaaacucgu
..(((((((((((((((((((((((((((((((((((((((((((((.((((((((.((((...(((.(((..........))).)))...)))))))))))).)))......))))))))))))))))))))))))))))))))))))))))))..

Structure

aa                                          ------   a        g    agg   u   agcu 
  gaguuuggGCUGGCGUCGACACGUGGCAUgagacuagucagu      ggc auuugcag uagc   gcu cuc    u
  ||||||||||||||||||||||||||||||||||||||||||      ||| |||||||| ||||   ||| |||     
  cucaaacCCGACUGCAGCUGUGCACUGUAcucugaucgguca      ccg uaaacguc auug   cga ggg    u
ug                                          gguuaa   c        -    gga   u   acuu