Accession
MI0019754
Description
Glycine max
gma-MIR530e precursor miRNA
Literature search
2 open access papers mention gma-MIR530e
(3 sentences)
(3 sentences)
Sequence
62614
reads,
575.0
reads per million, 154 experiments
uugaugccgauauguugccuuuaucUGCAUUUGCACCUGCACUUUAaguacucaguuucucugugacauauaaauaauauaacuaugucaguugaggacugaagagaucaauauauuauuauauaauaugggaauagagggaccgagaacgAGGUGCAGGUGCAUCUGCAGGUgaaugccauauuggauuauuggcc
.((((.((((((((..((.((((((((((..((((((((((((((..((.(((.((((((((((..(((((.(((((((((......((((((...)))))).........))))))))).....)))))...)))))))))).))).))))))))))))))))..)))))))))).))))))))))))))......
.((((.((((((((..((.((((((((((..((((((((((((((..((.(((.((((((((((..(((((.(((((((((......((((((...)))))).........))))))))).....)))))...)))))))))).))).))))))))))))))))..)))))))))).))))))))))))))......
Structure
-----u g uu c UU Aa a a -ga ----a ---acuaug g
ugau ccgauaug gc uuuaucUGCA UGCACCUGCACUUU gu cuc guuucucugu cauau aauaauaua ucaguu
|||| |||||||| || |||||||||| |||||||||||||| || ||| |||||||||| ||||| ||||||||| |||||| a
auua gguuauac cg aagUGGACGU ACGUGGACGUGGAg ca gag cagggagaua guaua uuauuauau agucag
ccgguu - -- u CU -- a c agg auaua aacuagaga g
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr13: 41764574-41764770 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gma-MIR530e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gma-miR530e-5p
| Accession | MIMAT0023209 |
| Description | Glycine max gma-miR530e-5p mature miRNA |
| Sequence | 26 - UGCAUUUGCACCUGCACUUUA - 46 |
| Evidence |
experimental
Illumina [1] |
Mature gma-miR530e-3p
| Accession | MIMAT0054324 |
| Description | Glycine max gma-miR530e-3p mature miRNA |
| Sequence | 152 - AGGUGCAGGUGCAUCUGCAGGU - 173 |
| Evidence |
experimental
unknown |
References
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