Accession
MI0019777
Description
Glycine max
gma-MIR399e precursor miRNA
Literature search
14 open access papers mention gma-MIR399e
(94 sentences)
(94 sentences)
Sequence
10718
reads,
90.0
reads per million, 170 experiments
guguggaucuucccaguugcagcugcauuacaGGGCAAGUUCUCCAUUGGCAGGuagccacuaugauaugcaucucauaaauauuugcaacuuucuuaaugugcaaucUGCCAAAGGAGAUUUGCCCAGcgauucuccu
....(((((....((((....)))).......((((((((.((((.(((((((((.((((.((.((..((((.............))))....)).)).)).)).))))))))).))))))))))))...)))))....
....(((((....((((....)))).......((((((((.((((.(((((((((.((((.((.((..((((.............))))....)).)).)).)).))))))))).))))))))))))...)))))....
Structure
gugu uucccaguugcagcugcauuaca U A a - c u --ua ucuca
ggauc GGGCAAGU CUCC UUGGCAGGu gc ca ua ga ugca u
||||| |||||||| |||| ||||||||| || || || || |||| a
cuuag CCCGUUUA GAGG AACCGUcua cg gu au cu acgu a
uccu --------------------cGA - A a u a u uuca uuaua
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr5: 35238378-35238516 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gma-MIR399e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gma-miR399e-5p
| Accession | MIMAT0054344 |
| Description | Glycine max gma-miR399e-5p mature miRNA |
| Sequence | 33 - GGGCAAGUUCUCCAUUGGCAGG - 54 |
| Evidence |
experimental
unknown |
Mature gma-miR399e-3p
| Accession | MIMAT0023232 |
| Description | Glycine max gma-miR399e-3p mature miRNA |
| Sequence | 109 - UGCCAAAGGAGAUUUGCCCAG - 129 |
| Evidence |
experimental
Illumina [1] |
References
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