Stem-loop gma-MIR2111f

Accession

MI0019783

Description

Glycine max gma-MIR2111f precursor miRNA

Literature search

6 open access papers mention gma-MIR2111f
(38 sentences)

Sequence

134098 reads, 404.0 reads per million, 178 experiments

ugggaaaagcUAAUCUGCAUCCUGAGGUUUAgagcaauguuuuuguugcaucuaGUCCUUGGGAUGCAGAUUAUCUcuuccuu
.(((((.((.(((((((((((((((((.(((((((((((....)))))).))))).))))))))))))))))).)).))))).

Structure

u     a  c                 U     -      u 
 gggaa ag UAAUCUGCAUCCUGAGG UUAga gcaaug u
 ||||| || ||||||||||||||||| ||||| ||||||  
 uccuu UC AUUAGACGUAGGGUUCC Gaucu cguugu u
u     c  U                 U     a      u 

Annotation confidence High

Genome context

chr7: 16494867-16494949 [-]

Mature gma-miR2111f-5p

• Accession: MIMAT0023238
• Description: Glycine max gma-miR2111f-5p mature miRNA
• Sequence: 11 - UAAUCUGCAUCCUGAGGUUUA - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR2111f-3p

• Accession: MIMAT0054350
• Description: Glycine max gma-miR2111f-3p mature miRNA
• Sequence: 55 - GUCCUUGGGAUGCAGAUUAUCU - 76
• Evidence: experimental ; unknown

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553