Dead hairpin entry

Stem-loop osa-MIR812p

Accession

MI0019799

Description

Oryza sativa osa-MIR812p precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

9 open access papers mention osa-MIR812p
(16 sentences)

Sequence

87517 reads, 352.0 reads per million, 142 experiments

ccuauuuuaagugcagccaugaUUUUCCGUGCACAACUUUAAucguccguuuuacuugaauuuuuuuugaaaaaaaugaaaaaguaagucacguauaaaguacuauucauauuuuaucaucccauaacaauaaaaaugcaaauuauaaaaaaaauucaaauaaGACGGACGAUUAAAGUUGGGCAUGaaaacuuaugguugcacuuaaaauggg
((((((((((((((((((((((.(((.(((((.(((((((((((((((((((((.((((((((((((((......((((.((((((.(....((((...))))....).)))))).))))..............(((....))).)))))))))))))).))))))))))))))))))))).))))).))).))))))))))))))))))))))

Structure

                      U   C     A                     c              -------------------aaaaaa    a      a ucac    a 
ccuauuuuaagugcagccauga UUU CGUGC CAACUUUAAucguccguuuua uugaauuuuuuuug                         auga aaagua g    guau  
|||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||                         |||| |||||| |    |||| a
ggguaaaauucacguugguauu aaa GUACG GUUGAAAUUAGCAGGCAGaau aacuuaaaaaaaau                         uacu uuuuau c    caug  
                      c   a     G                     a              auuaaacguaaaaauaacaauaccc    a      a uuau    a