miRBase entry: osa-MIR812q

Dead hairpin entry

Stem-loop osa-MIR812q


Accession
MI0019800
Description
Oryza sativa osa-MIR812q precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
9 open access papers mention osa-MIR812q
(15 sentences)

Sequence

348745 reads, 1194.0 reads per million, 142 experiments
uacuccauccgucucaaaauaagugcaguuuugcacuauucauacuuaacauuugaaCGUUCGUCUUAUUUGAAAAuuuuuuaugauuaguauuuuuauugcuauuagauguuaaaacauaaauaguacuuuaugugugacuaaauauuuucaauuuuuucacaaaauuuucaaAUAAGACGGACAGUCAAACGUUGGguacgaauaucuacggcugcacuuauuuugggacggagguagua
((((((.(((((((((((((((((((((((......(((((.((((((((.(((((..((((((((((((((((((((((.......(((((.......)))))............(((((((......)))))))((((..((((.......))))..))))))))))))))))))))))))))..))))).)))))))).))))).....))))))))))))))))))))))))).))))

Structure
    -  a                       uugcac     a        a     aC                      uuaugauuaguauuuuuauugcuauuagauguuaaaacauaaauaguacuuuaugu    cu    au 
uacu cc uccgucucaaaauaagugcaguu      uauuc uacuuaac uuuga  GUUCGUCUUAUUUGAAAAuuuu                                                        guga  aaau  u
|||| || |||||||||||||||||||||||      ||||| |||||||| |||||  ||||||||||||||||||||||                                                        ||||  ||||  u
auga gg aggcaggguuuuauucacgucgg      auaag augGGUUG AAACU  CAGGCAGAAUAaacuuuuaaaa                                                        cacu  uuua  u
    u  -                       -caucu     c        C     GA                      --------------------------------------------------------    uu    ac