Stem-loop osa-MIR5797

Accession

MI0019810

Description

Oryza sativa osa-MIR5797 precursor miRNA

Literature search

2 open access papers mention osa-MIR5797
(2 sentences)

Sequence

ucacugcuguUCGUGGGAUUUAUGCAGUUAAugucguuuugccugcugauccuacuuauacagugu
.(((((.(((..((((((((...((((.(((.......))).)))).))))))))..)))))))).

Structure

u     c   UC        UAU    U   ug 
 cacug ugu  GUGGGAUU   GCAG UAA  u
 ||||| |||  ||||||||   |||| |||  c
 gugac aua  cauccuag   cguc guu  g
u     -   uu        --u    c   uu 

Annotation confidence Not enough data

Genome context

Chr8: 17084767-17084832 [+]

Mature osa-miR5797

• Accession: MIMAT0023265
• Description: Oryza sativa osa-miR5797 mature miRNA
• Sequence: 11 - UCGUGGGAUUUAUGCAGUUAA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207