miRBase entry: osa-MIR812s

Dead hairpin entry

Stem-loop osa-MIR812s


Accession
MI0019812
Description
Oryza sativa osa-MIR812s precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
11 open access papers mention osa-MIR812s
(18 sentences)

Sequence

61388 reads, 262.0 reads per million, 142 experiments
uggguuuucguguacaacaUGAUCGUUCGUCUUAUUUGAAAAuuuuaugaaaaaauuaaaaaaaucacacauaaaguacuauucauauuuuaucauccaauaauaauaaaaauacuaaucacaaaagaauuuuuaAUAAGACGGACAAUCAAACGUUGGacacagaaauuc
.(((((((.((((.((((.((((.((((((((((((.(((((((((((((.(((((..............................))))).)))).............................))))))))))))))))))))).))))...)))).)))).)))))))

Structure
u       c    a    --a    C            U         -----------------------------    a     uaaaaaaaucacac 
 ggguuuu gugu caac   UGAU GUUCGUCUUAUU GAAAAuuuu                             auga aaaau              a
 ||||||| |||| ||||   |||| |||||||||||| |||||||||                             |||| |||||               
 cuuaaag caca GUUG   ACUA CAGGCAGAAUAa uuuuuaaga                             uacu uuuua              u
-       a    G    CAA    A            -         aaacacuaaucauaaaaauaauaauaacc    a     uacuuaucaugaaa