Dead hairpin entry

Stem-loop osa-MIR812t

Accession

MI0019817

Description

Oryza sativa osa-MIR812t precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

9 open access papers mention osa-MIR812t
(15 sentences)

Sequence

123354 reads, 461.0 reads per million, 142 experiments

uauguuccauuuuaagugaaaccaugaguuuuUUACCGAACUUUGAUUGUCUgucuuauuugaaauuuuuuuauaauuaguauuuuuacuguuaugagaugauaaagcaugaauaauacuuuaugcaugacuuaugcuuuuaauuuuuucaaauuuuuuucaaauaagacgaacgaucaaaguuuagcACGGAAAAUCAUGGCUGCACUUAAaauagaacau
.((((((.((((((((((...((((((.((((((.(.(((((((((((((.((((((((((((((((.(((((((((.((((....))))))))))))).)))(((((((((...((.(.....).))...)))))))))..................))))))))))))).))))))))))))).)...))))))))))))...)))))))))).))))))

Structure

u      c          aaa      g      --A C             C             -------------------------------------------------------   u         u    u 
 auguuc auuuuaagug   ccauga uuuuUU   C GAACUUUGAUUGU Ugucuuauuugaa                                                       auu uuuuauaau agua u
 |||||| ||||||||||   |||||| ||||||   | ||||||||||||| |||||||||||||                                                       ||| ||||||||| ||||  
 uacaag uaaAAUUCAC   GGUACU AAAAGG   g uuugaaacuagca gcagaauaaacuu                                                       uag agaguauug ucau u
-      a          GUC      -      CAc a             a             uuuuuaaacuuuuuuaauuuucguauucaguacguauuucauaauaaguacgaaa   u         -    u