Dead hairpin entry

Stem-loop osa-MIR812u

Accession

MI0019818

Description

Oryza sativa osa-MIR812u precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

9 open access papers mention osa-MIR812u
(15 sentences)

Sequence

60101 reads, 187.0 reads per million, 142 experiments

uguuuuauuuuaaguguaaccauaaaauuucAUGCCCAAUUUUGAUCGUucaucuuauuuggauuuuuuuauaauuaauauuuuuauuauuaugagauaauaagacaugaauaguuacuuuauuuguaacuuacguuuuuaauuuuuuuaaguuuuuuaaaagacggacggucaaaguugaucACGGAAAAUCAUGGCUGCACUUAAaaaugggaca
((((((((((((((((((.((((....((((.((..(((((((((((((((((((.....))))..(((((((((.((((....)))))))))))))...(((((.(((...((((((.......))))))..))))))))..((((((((.....)))))))).)))))))))))))))..)).))))....)))).))))))).)))))))))))

Structure

           -       a    aaaa    A  CC               aucuuauuuggauuuuuuuauaauuaauauuuuuauuauuaugagauaa     c   aau      uu 
uguuuuauuuu aagugua ccau    uuuc UG  CAAUUUUGAUCGUuc                                                 uaaga aug   aguuac  u
||||||||||| ||||||| ||||    |||| ||  |||||||||||||||                                                 ||||| |||   ||||||  a
acaggguaaaA UUCACGU GGUA    AAGG Ac  guugaaacuggcagg                                                 auuuu ugc   ucaaug  u
           A       C    CUAA    C  ua               -------------------------cagaaaauuuuuugaauuuuuuua     -   -au      uu