Stem-loop osa-MIR5806

Accession

MI0019822

Description

Oryza sativa osa-MIR5806 precursor miRNA

Literature search

3 open access papers mention osa-MIR5806
(3 sentences)

Sequence

ggguccgagcugcauuuggauuagccgaucuggaaguuagcaaguuagaaACAGGCAAAGACAAUGACGGCucuuggaugu
..((((((((((((((.(..((.(((..(((((...........)))))....))).))..))))).))))))..))))..

Structure

gg    --      -    u ga  a   --ga     aagu 
  gucc  gagcug cauu g  uu gcc    ucugg    u
  ||||  |||||| |||| |  || |||    |||||    a
  uagg  cuCGGC GUAA C  AA CGG    agauu    g
ug    uu      A    - AG  A   ACAa     gaac 

Annotation confidence Not enough data

Genome context

Chr6: 24708626-24708706 [+]

Mature osa-miR5806

• Accession: MIMAT0023277
• Description: Oryza sativa osa-miR5806 mature miRNA
• Sequence: 51 - ACAGGCAAAGACAAUGACGGC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207