Stem-loop osa-MIR5801b

Accession

MI0019825

Description

Oryza sativa osa-MIR5801b precursor miRNA

Sequence

45 reads, 31 reads per million, 2 experiments

uACUAAAUCGUUUCUGAUCGUUGGAuuuagcuggauaagauauguauuauuggauccagcgauuggaaacaauuuggua
((((((((.(((((((((((((((((((((.((.(((...))).))...))))))))))))))))))))).))))))))

Structure

        C                     --c  g   a 
uACUAAAU GUUUCUGAUCGUUGGAuuuag   ug aua  
|||||||| |||||||||||||||||||||   || ||| g
augguuua caaagguuagcgaccuagguu   au uau  
        a                     auu  g   a 

Annotation confidence Not enough data

Genome context

Chr9: 18739255-18739333 [+]

Mature osa-miR5801b

• Accession: MIMAT0023280
• Description: Oryza sativa osa-miR5801b mature miRNA
• Sequence: 2 - ACUAAAUCGUUUCUGAUCGUUGGA - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207