Stem-loop osa-MIR5820

Accession

MI0019838

Description

Oryza sativa osa-MIR5820 precursor miRNA

Sequence

ggaaauugaacuuaaauccuuaaucguuugcuagauuuuucuugugagugaccUGGCAGAGAUUGAUCGAGGAAuuguauuucc
((((((...((.....(((((.((((((((((((.((.(((....))).)).))))))))...)))).)))))...))))))))

Structure

      uga  uuaaa     a    ---        a  u   u 
ggaaau   ac     uccuu aucg   uuugcuag uu uuc u
||||||   ||     ||||| ||||   |||||||| || |||  
ccuuua   ug     AGGAG UAGU   AGACGGUc ag gag g
      ---  --uuA     C    UAG        c  u   u 

Annotation confidence Not enough data

Genome context

Chr10: 13982605-13982688 [+]

Mature osa-miR5820

• Accession: MIMAT0023293
• Description: Oryza sativa osa-miR5820 mature miRNA
• Sequence: 54 - UGGCAGAGAUUGAUCGAGGAA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207