Stem-loop osa-MIR5836

Accession

MI0019857

Description

Oryza sativa osa-MIR5836 precursor miRNA

Literature search

2 open access papers mention osa-MIR5836
(2 sentences)

Sequence

uuacgaggcaUGAGCAGCCGGACCAUGGGAUauucaggcacuccugguguuucacauuccuaauggccucuacuguagcugccauguaa
.((((.((((...((((..((.((((((((.....(((((((...))))))).....)))).))))))....))))...)))).)))).

Structure

u    a    UGA    --CC  A    -    Uauuc       c 
 uacg ggca   GCAG    GG CCAU GGGA     aggcacu  
 |||| ||||   ||||    || |||| ||||     ||||||| c
 augu ccgu   uguc    cc ggua uccu     uuugugg  
a    a    cga    aucu  -    a    uacac       u 

Annotation confidence Not enough data

Genome context

Chr6: 17701867-17701955 [-]

Mature osa-miR5836

• Accession: MIMAT0023312
• Description: Oryza sativa osa-miR5836 mature miRNA
• Sequence: 11 - UGAGCAGCCGGACCAUGGGAU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207