Stem-loop hco-mir-63a

Accession

MI0019994

Description

Haemonchus contortus hco-mir-63a precursor miRNA

Literature search

1 open access papers mention hco-mir-63a
(1 sentences)

Sequence

cuuguauucuucugaugaucauaccuguucgacgggagucaucguccuuaugguacAAUGACACUGUUGCGAACUGGGAUggucaaaggcauucguuccgcaua
...........((..((((((..((.(((((((((..(((((.((((....)).)).))))).))))..))))).))..))))))..))...............

Structure

----cuuguauucuu  ga      ua  u     --    ga     c  -  u 
               cu  ugauca  cc guucg  acgg  gucau gu cc u
               ||  ||||||  || |||||  ||||  ||||| || ||  
               gg  acuggU  GG CAAGC  UGUC  CAGUA ca gg a
auacgccuugcuuac  aa      AG  U     GU    -A     A  u  u 

Annotation confidence Low

Genome context

Unknown

Mature hco-miR-63a

• Accession: MIMAT0023318
• Description: Haemonchus contortus hco-miR-63a mature miRNA
• Sequence: 57 - AAUGACACUGUUGCGAACUGGGAU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4