Stem-loop hco-mir-5910

Accession

MI0020039

Description

Haemonchus contortus hco-mir-5910 precursor miRNA

Sequence

uccaagcgugCCUCCCCAAUUCGAUCGAGGCGAguucauacaucgcccagacgaaguuggggaagcauauucuga
.......((((.(((((((((((.((..(((((((....)).)))))..)))).))))))))).)))).......

Structure

uccaagc    C         -  A  GA     -  u 
       gugC UCCCCAAUU CG UC  GGCGA gu c
       |||| ||||||||| || ||  ||||| ||  
       uacg agggguuga gc ag  ccgcu ca a
agucuua    a         a  -  ac     a  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5910

• Accession: MIMAT0023366
• Description: Haemonchus contortus hco-miR-5910 mature miRNA
• Sequence: 11 - CCUCCCCAAUUCGAUCGAGGCGA - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4