Stem-loop hco-mir-242

Accession

MI0020042

Description

Haemonchus contortus hco-mir-242 precursor miRNA

Sequence

uucaguaccaCUUGCGUAGGCCUUCGUGUAACGAgaauuaugucaucgugacacgaugcugcgcaaguaguacugcu
..((((((.((((((((((....((((((.((((((......)).)))).))))))..)))))))))).))))))..

Structure

uu      c          GCCU      A    -  au 
  caguac aCUUGCGUAG    UCGUGU ACGA ga  u
  |||||| ||||||||||    |||||| |||| ||   
  gucaug ugaacgcguc    agcaca ugcu cu  a
uc      a          --gu      g    a  gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-242

• Accession: MIMAT0023369
• Description: Haemonchus contortus hco-miR-242 mature miRNA
• Sequence: 11 - CUUGCGUAGGCCUUCGUGUAACGA - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4