Stem-loop hco-mir-5916

Accession

MI0020057

Description

Haemonchus contortus hco-mir-5916 precursor miRNA

Sequence

agcuauaacuaaucuuuuugaugagauguucuguccuaaucuacagcuggGCAGACCAUCUGAUCAGAGAGAUuaguuacggc
.(((.(((((((((((((((((.(((((.(((((((............))))))).))))).))))))))))))))))).)))

Structure

a   a                 g     u       uaauc 
 gcu uaacuaaucuuuuugau agaug ucugucc     u
 ||| ||||||||||||||||| ||||| |||||||      
 cgg auugauUAGAGAGACUA UCUAC AGACGgg     a
-   c                 G     C       ucgac 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5916

• Accession: MIMAT0023385
• Description: Haemonchus contortus hco-miR-5916 mature miRNA
• Sequence: 51 - GCAGACCAUCUGAUCAGAGAGAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4