Stem-loop hco-mir-5922

Accession

MI0020069

Description

Haemonchus contortus hco-mir-5922 precursor miRNA

Sequence

ugguaguguuCGGGUGACUUGAGUACAUGAACUuugacugaccauguacucaagucgcccaaacaccacug
.(((.(((((.((((((((((((((((((..(.......)..)))))))))))))))))).))))).))).

Structure

u   a     C                  AA Uu 
 ggu guguu GGGUGACUUGAGUACAUG  C  u
 ||| ||||| ||||||||||||||||||  |  g
 uca cacaa cccgcugaacucauguac  g  a
g   c     a                  ca uc 

Annotation confidence Low

Genome context

Unknown

Mature hco-miR-5922

• Accession: MIMAT0023398
• Description: Haemonchus contortus hco-miR-5922 mature miRNA
• Sequence: 11 - CGGGUGACUUGAGUACAUGAACU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4