miRBase entry: hco-mir-5937

Dead hairpin entry

Stem-loop hco-mir-5937


Accession
MI0020101
Description
Haemonchus contortus hco-mir-5937 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

100 reads, 2.0 reads per million, 15 experiments
uuaacgacaaugacugcuuuCAUAGUCCACGAUUUGGCgagcgagcgaccggucguucgcccAAUCGUGGACUAUGGAAGCAGCcaaugauuggcaagauaugcuaaccc
.......((.((.(((((((((((((((((((((.(((((((((.(....).))))))))).))))))))))))))))))))).)).)).((((((.....))))))...

Structure
--------------uuaacga  a  a                     U         g g 
                     ca ug cugcuuuCAUAGUCCACGAUU GGCgagcga c a
                     || || ||||||||||||||||||||| ||||||||| |  
                     gu ac GACGAAGGUAUCAGGUGCUAA ccgcuugcu g c
cccaaucguauagaacgguua  a  C                     c         g c