Stem-loop hco-mir-63b

Accession

MI0020109

Description

Haemonchus contortus hco-mir-63b precursor miRNA

Literature search

1 open access papers mention hco-mir-63b
(1 sentences)

Sequence

cucguccucacuccgauucgccgguagucaucgucaucggugagcaCUAUGACACUGUCGCGAAUUGGGGugauuagagc
(((....((((((((((((((((((.(((((.((..((...))..)).)))))))))..))))))))))))))...))).

Structure

-   gucc              --    a     c  ca  g 
 cuc    ucacuccgauucgc  cggu gucau gu  uc  
 |||    ||||||||||||||  |||| ||||| ||  || g
 gag    aguGGGGUUAAGCG  GUCA CAGUA Ca  ag  
c   -auu              CU    -     U  cg  u 

Annotation confidence Low

Genome context

Unknown

Mature hco-miR-63b

• Accession: MIMAT0023440
• Description: Haemonchus contortus hco-miR-63b mature miRNA
• Sequence: 47 - CUAUGACACUGUCGCGAAUUGGGG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4