Accession
MI0020146
Description
Haemonchus contortus
hco-mir-5971 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.
Literature search
1 open access papers mention hco-mir-5971
(1 sentences)
(1 sentences)
Sequence
1528
reads,
14.0
reads per million, 21 experiments
cacuaucgcuuuguauauuGCGGGGGUGAUGAAUAGUgaaugggaaucucuaugaauGUAGAUGAUUUCAAAAAUCACGCGUCCUGACCCGcuugaagccugauggguggcaucg
.....((((..........))))((((.(.((...((((...(((((((((((....))))).)))))).....))))...)).).))))....((.(((........))).)).
.....((((..........))))((((.(.((...((((...(((((((((((....))))).)))))).....))))...)).).))))....((.(((........))).)).
Structure
--cacuaucgcuuuguauauuGCGG G U AUA --aug - g
GGGU A GA GUga ggaauc ucuau a
|||| | || |||| |||||| |||||
CCCA U CU CACU CUUUAG AGAUG a
gcuacgguggguaguccgaaguucG G C GCG AAAAA U u
