Stem-loop hco-mir-5985-1

Accession

MI0020165

Description

Haemonchus contortus hco-mir-5985-1 precursor miRNA

Sequence

gcgaggaugaAAACACUGACUUGUAACAUCGGCuggccaccagccgauguuacaagucaguguuuuuauccucgca
((((((((((((((((((((((((((((((((((((...)))))))))))))))))))))))))))))))))))).

Structure

-                                    c 
 gcgaggaugaAAACACUGACUUGUAACAUCGGCugg  
 |||||||||||||||||||||||||||||||||||| c
 cgcuccuauuuuugugacugaacauuguagccgacc  
a                                    a 

Annotation confidence Low

Genome context

Unknown

Mature hco-miR-5985

• Accession: MIMAT0023497
• Description: Haemonchus contortus hco-miR-5985 mature miRNA
• Sequence: 11 - AAACACUGACUUGUAACAUCGGC - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4