miRBase entry: hco-mir-5985-2

Dead hairpin entry

Stem-loop hco-mir-5985-2


Accession
MI0020166
Description
Haemonchus contortus hco-mir-5985-2 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

85 reads, 1.0 reads per million, 14 experiments
cgaggauaaAAACACUGACUUGUAACAUCGGCugguggccaGCCGAUGUUACAAGUCAGUGUUuucauccucgc
(((((((.(((((((((((((((((((((((((((...))))))))))))))))))))))))))).))))))).

Structure
-       a                           u 
 cgaggau aAAACACUGACUUGUAACAUCGGCugg  
 ||||||| ||||||||||||||||||||||||||| g
 gcuccua uuUUGUGACUGAACAUUGUAGCCGacc  
c       c                           g