Stem-loop hco-mir-2159

Accession

MI0020178

Description

Haemonchus contortus hco-mir-2159 precursor miRNA

Sequence

ucaaugccaaugucguuacuucaaucagaagcgucuaacaccccccccccccuuuauuuggccucaacccUAAGGGGCCAAAUAAAGGGGGGGggggccaaau
..............((((((((.....))))....))))..((((((((((((((((((((((((........))))))))))))))))))))))))......

Structure

ucaaugccaaugucguuacuucaaucagaagcgucuaacac                        aac 
                                         cccccccccccuuuauuuggccuc   c
                                         ||||||||||||||||||||||||    
                                         ggggGGGGGGGAAAUAAACCGGGG   c
-----------------------------------uaaacc                        AAU 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-2159-3p

• Accession: MIMAT0023509
• Description: Haemonchus contortus hco-miR-2159-3p mature miRNA
• Sequence: 71 - UAAGGGGCCAAAUAAAGGGGGGG - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4