Stem-loop hhv6b-mir-Ro6-3

Accession

MI0020181

Description

Human herpesvirus 6B hhv6b-mir-Ro6-3 precursor miRNA

Sequence

ccggagcggcGACGGAGCCCGCUCGGUAUCGcggacgugcgAGACCGAGCGGGCUCCAUCCGccgcucgguc
(((.((((((((.((((((((((((((.(((((....))))).)))))))))))))).).))))))))))..

Structure

--   g       - C              A     g 
  ccg agcggcG A GGAGCCCGCUCGGU UCGcg a
  ||| ||||||| | |||||||||||||| |||||  
  ggc ucgccGC U CCUCGGGCGAGCCA Agcgu c
cu   -       C A              G     g 

Annotation confidence Low

Genome context

Unknown

Mature hhv6b-miR-Ro6-3-5p

• Accession: MIMAT0026460
• Description: Human herpesvirus 6B hhv6b-miR-Ro6-3-5p mature miRNA
• Sequence: 11 - GACGGAGCCCGCUCGGUAUCG - 31
• Evidence: experimental ; cloned [1]

Mature hhv6b-miR-Ro6-3-3p

• Accession: MIMAT0026461
• Description: Human herpesvirus 6B hhv6b-miR-Ro6-3-3p mature miRNA
• Sequence: 42 - AGACCGAGCGGGCUCCAUCCG - 62
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 22114334
   Small RNA deep sequencing identifies microRNAs and other small noncoding RNAs from human herpesvirus 6B
   "Tuddenham L, Jung JS, Chane-Woon-Ming B, Dolken L, Pfeffer S"
   "J Virol (2012) 86:1638-1649