Accession
MI0020190
Description
Arabidopsis thaliana
ath-MIR5996 precursor miRNA
Sequence
74491
reads,
365.0
reads per million, 183 experiments
guacuaauuuuucgagcacaUGACAUCCAGAUAGAAGCUUUGuuaaacgucaucaaagucaagauuugguauaaacguuuaacaaacUUCUAUUUGGAUGUCAUGUGCUCGaagaguuagaacua
((.((((((((((((((((((((((((((((((((((.((((((((((((.((((((.......))))))....)))))))))))))))))))))))))))))))))))))))))))))).))..
((.((((((((((((((((((((((((((((((((((.((((((((((((.((((((.......))))))....)))))))))))))))))))))))))))))))))))))))))))))).))..
Structure
-- a C ---c gu gu cuaauuuuucgagcacaUGACAUCCAGAUAGAAG UUUGuuaaacgu aucaaa c || |||||||||||||||||||||||||||||||||| |||||||||||| |||||| a ca gauugagaaGCUCGUGUACUGUAGGUUUAUCUUc aaacaauuugca ugguuu a au a - aaua ag
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr4: 7882765-7882889 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from ath-MIR5996
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ath-miR5996-5p
| Accession | MIMAT0023519 |
| Description | Arabidopsis thaliana ath-miR5996-5p mature miRNA |
| Sequence | 21 - UGACAUCCAGAUAGAAGCUUUG - 42 |
| Evidence |
experimental
Illumina [1] |
Mature ath-miR5996-3p
| Accession | MIMAT0053972 |
| Description | Arabidopsis thaliana ath-miR5996-3p mature miRNA |
| Sequence | 88 - UUCUAUUUGGAUGUCAUGUGCUCG - 111 |
| Evidence |
experimental
unknown |
References
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