Stem-loop ath-MIR5014b

Accession

MI0020195

Description

Arabidopsis thaliana ath-MIR5014b precursor miRNA

Sequence

uagucacuuuucacuguuugAUUUGUACACCUAGAUCUGUAcaacacuuuuauuguacagauguaaguguacguuguguauuuuuauauacauuuguacacuaaaaauguuguacagaucuaaguguacaaaucaaacagu
............((((((((((((((((((.(((((((((((((((.(((((.((((((((((((.((((((.....))))....)).)))))))))))).))))).))))))))))))))).))))))))))))))))))

Structure

uagucacuuuuc                  C               c     u            a  ----    g 
            acuguuugAUUUGUACAC UAGAUCUGUAcaaca uuuua uguacagaugua gu    guac u
            |||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||    |||| u
            ugacaaacuaaacaugug aucuagacauguugu aaaau acauguuuacau ua    uaug g
------------                  a               a     c            a  uuuu    u 

Annotation confidence Not enough data

Genome context

chr1: 24605427-24605567 [-]

Mature ath-miR5014b

• Accession: MIMAT0023524
• Description: Arabidopsis thaliana ath-miR5014b mature miRNA
• Sequence: 21 - AUUUGUACACCUAGAUCUGUA - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22221297
   Global analysis of non-coding small RNAs in Arabidopsis in response to jasmonate treatment by deep sequencing technology
   "Zhang B, Xie D, Jin Z"
   "J Integr Plant Biol (2012) 54:73-86