Stem-loop dpr-MIR156a

Accession

MI0020197

Description

Digitalis purpurea dpr-MIR156a precursor miRNA

Literature search

1 open access papers mention dpr-MIR156a
(3 sentences)

Sequence

agggauuUGACAGAAGAGAGGGAGCACaggcagggaaauuguauagagauuaguguuuuauacguuuaugcgugugaucccuucccuucugucagcuaauucca
.(((((((((((((((.((((((.((((.(((..(((..(((((((((.......)))))))))))).))).)))).)))).)).)))))))))...)))))).

Structure

a      ---         A  -    G    g   gg   au         au 
 gggauu   UGACAGAAG GA GGGA CACa gca  gaa  uguauagag  u
 ||||||   ||||||||| || |||| |||| |||  |||  |||||||||  a
 ccuuaa   acugucuuc cu cccu gugu cgu  uuu  gcauauuuu  g
a      ucg         c  u    a    g   -a   --         gu 

Annotation confidence Low

Genome context

Unknown

Mature dpr-miR156a

• Accession: MIMAT0023526
• Description: Digitalis purpurea dpr-miR156a mature miRNA
• Sequence: 8 - UGACAGAAGAGAGGGAGCAC - 27
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 22233149
   Comprehensive transcriptome analysis reveals novel genes involved in cardiac glycoside biosynthesis and mlncRNAs associated with secondary metabolism and stress response in Digitalis purpurea
   Wu B, Li Y, Yan H, Ma Y, Luo H, Yuan L, Chen S, Lu S
   BMC Genomics (2012) 13:15