Stem-loop ame-mir-2765

Accession

MI0020216

Description

Apis mellifera ame-mir-2765 precursor miRNA

Sequence

auuacugugucgaggauUGGUAACUCCACCACCGUUGGCggaaucuaauagcCAAUGGGGUACGAGUUUCCUUCucucggcgcgaaaug
.....(((((((((((..((.(((((.(((.((((((((...........)))))))))))..))))).)).)).))))))))).....

Structure

auuac         -  uU  U     -C   A        ggaa 
     ugugucgag ga  GG AACUC  ACC CCGUUGGC    u
     ||||||||| ||  || |||||  ||| ||||||||    c
     gcgcggcuc CU  CC UUGAG  UGG GGUAACcg    u
guaaa         u  -U  U     CA   -        auaa 

Annotation confidence Low

Genome context

CM000062.5: 5128388-5128476 [-]

Mature ame-miR-2765-5p

• Accession: MIMAT0023551
• Description: Apis mellifera ame-miR-2765-5p mature miRNA
• Sequence: 18 - UGGUAACUCCACCACCGUUGGC - 39
• Evidence: experimental ; SOLiD [1], Illumina [3-5]

Mature ame-miR-2765-3p

• Accession: MIMAT0023552
• Description: Apis mellifera ame-miR-2765-3p mature miRNA
• Sequence: 53 - CAAUGGGGUACGAGUUUCCUUC - 74
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805


2. PubMed ID: 22458842
   Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
   "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
   "Insect Mol Biol (2012) 21:297-303


3. PubMed ID: 22171334
   Detection of microRNAs in color space
   "Marco A, Griffiths-Jones S"
   "Bioinformatics (2012) 28:318-323


4. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670


5. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226