miRBase entry: nta-MIR6019b

Stem-loop nta-MIR6019b


Accession
MI0020234
Description
Nicotiana tabacum nta-MIR6019b precursor miRNA

Literature search
1 open access papers mention nta-MIR6019b
(2 sentences)

Sequence

ucuccuaguugucaaaaguucgUACAGGUGACUUGUAAAUGUUUugcugaccuucuaauaugauauaacuggcaaaacauuuacacguaccuuguaugaacuuuugauucuagcuuug
....((((..((((((((((((((((((((.(.(((((((((((((((.....((......)).......))))))))))))))).))))).)))))))))))))))).)))).....

Structure
-ucuc    uu                -    A U               --gaccu  ua 
     cuag  gucaaaaguucgUACA GGUG C UGUAAAUGUUUugcu       uc  a
     ||||  |||||||||||||||| |||| | |||||||||||||||       ||   
     gauc  uaguuuucaaguaugu ccau g acauuuacaaaacgg       ag  u
guuuc    -u                u    - c               ucaauau  ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6019b

Accession MIMAT0023586
Description Nicotiana tabacum nta-miR6019b mature miRNA
Sequence 23 - UACAGGUGACUUGUAAAUGUUU - 44
Evidence not_experimental

References

  1. PubMed ID: 22307647
    MicroRNA regulation of plant innate immune receptors
    "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
    "Proc Natl Acad Sci U S A (2012) 109:1790-1795