Stem-loop nta-MIR6019b

Accession

MI0020234

Description

Nicotiana tabacum nta-MIR6019b precursor miRNA

Literature search

1 open access papers mention nta-MIR6019b
(2 sentences)

Sequence

37924 reads, 3756.0 reads per million, 41 experiments

ucuccuaguugucaaaaguucgUACAGGUGACUUGUAAAUGUUUugcugaccuucuaauaugauauaacuggcaaaACAUUUACACGUACCUUGUAUGaacuuuugauucuagcuuug
....((((..((((((((((((((((((((.(.(((((((((((((((.....((......)).......))))))))))))))).))))).)))))))))))))))).)))).....

Structure

-ucuc    uu                -    A U               --gaccu  ua 
     cuag  gucaaaaguucgUACA GGUG C UGUAAAUGUUUugcu       uc  a
     ||||  |||||||||||||||| |||| | |||||||||||||||       ||   
     gauc  uaguuuucaaGUAUGU CCAU G ACAUUUACAaaacgg       ag  u
guuuc    -u                U    - C               ucaauau  ua 

Annotation confidence Medium

Genome context

Unknown

Mature nta-miR6019b-5p

• Accession: MIMAT0023586
• Description: Nicotiana tabacum nta-miR6019b-5p mature miRNA
• Sequence: 23 - UACAGGUGACUUGUAAAUGUUU - 44
• Evidence: not_experimental

Mature nta-miR6019b-3p

• Accession: MIMAT0058019
• Description: Nicotiana tabacum nta-miR6019b-3p mature miRNA
• Sequence: 77 - ACAUUUACACGUACCUUGUAUG - 98
• Evidence: experimental ; unknown

References

1. PubMed ID: 22307647
   MicroRNA regulation of plant innate immune receptors
   "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
   "Proc Natl Acad Sci U S A (2012) 109:1790-1795