Stem-loop nta-MIR6020b

Accession

MI0020235

Description

Nicotiana tabacum nta-MIR6020b precursor miRNA

Sequence

58060 reads, 3413.0 reads per million, 42 experiments

ucccuaugcagcugacuuguAAAUGUUCUUCGAGUAUCUUCauucuuccuuaauccuaaugaaguuuuagaggcgaAGAUACUCGAAAAACAUUUACUuguuauuuguauagaauua
...((((((((.((((..(((((((((.(((((((((((((...((((..(((..((.....))..))))))).))))))))))))).)))))))))..)))).)))))))).....

Structure

--ucc        c    uu         C             auu    cu   uc  a 
     cuaugcag ugac  guAAAUGUU UUCGAGUAUCUUC   cuuc  uaa  cu a
     |||||||| ||||  ||||||||| |||||||||||||   ||||  |||  || u
     gauauguu auug  CAUUUACAA AAGCUCAUAGAag   ggag  auu  ga g
auuaa        u    uU         A             --c    --   uu  a 

Annotation confidence High

Genome context

Unknown

Mature nta-miR6020b-5p

• Accession: MIMAT0023587
• Description: Nicotiana tabacum nta-miR6020b-5p mature miRNA
• Sequence: 21 - AAAUGUUCUUCGAGUAUCUUC - 41
• Evidence: not_experimental

Mature nta-miR6020b-3p

• Accession: MIMAT0058020
• Description: Nicotiana tabacum nta-miR6020b-3p mature miRNA
• Sequence: 77 - AGAUACUCGAAAAACAUUUACU - 98
• Evidence: experimental ; unknown

References

1. PubMed ID: 22307647
   MicroRNA regulation of plant innate immune receptors
   "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
   "Proc Natl Acad Sci U S A (2012) 109:1790-1795