Stem-loop nta-MIR6021

Accession

MI0020236

Description

Nicotiana tabacum nta-MIR6021 precursor miRNA

Sequence

agccuuuagagauuagagagUUGGAAGAGGCUGCUAUUGGAaucaaucgucccggguaagcaggcugcaacuaaggucaaguucaaucauguggcccgacaucucaucacaguucacuccuucccauaggcagcaaucuccgcucuuauuccaugguauuguuu
.(((....(((....((((((.(((.((.((((((..(((............(((((..(((((.((.((((.......)))))).)).))).)))))............((....)).....)))..))))))..))))))))))).)))...))).......

Structure

------a   uuua   auua      U   A  -G      AU   -------------Aaucaaucgucc     aa   -  c  c    aa 
       gcc    gag    gagagU GGA GA  GCUGCU  UGG                         cgggu  gca gg ug aacu  g
       |||    |||    |||||| ||| ||  ||||||  |||                         |||||  ||| || || ||||  g
       ugg    cuu    uucucg ccu cu  cgacgg  acc                         gcccg  ugu cu ac uuga  u
uuuguua   -uac   ---a      -   -  aa      au   cuuccucacuugacacuacucuaca     -g   a  a  -    ac 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR6021

• Accession: MIMAT0023588
• Description: Nicotiana tabacum nta-miR6021 mature miRNA
• Sequence: 21 - UUGGAAGAGGCUGCUAUUGGA - 41
• Evidence: not_experimental

References

1. PubMed ID: 22307647
   MicroRNA regulation of plant innate immune receptors
   "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
   "Proc Natl Acad Sci U S A (2012) 109:1790-1795