Stem-loop sly-MIR6024

Accession

MI0020242

Description

Solanum lycopersicum sly-MIR6024 precursor miRNA MIR6024

Gene
family

RF03598; MIR6024

Literature search

13 open access papers mention sly-MIR6024
(79 sentences)

Sequence

aacuggaaauggggaaguggagaaacaacacuugcuaaaggaaguucaccagucaucucuuuucuuuuggaguuuUUUUAGCAAGAGUUGUUUUACCucuucucaauuccgucucuc
...(((((...((((((.((.((((((((.(((((((((((((.((((..((...........))..)))).))))))))))))).)))))))).)).))))))..)))))......

Structure

---aac     aug      u  a        a             g    cc  ucau 
      uggaa   gggaag gg gaaacaac cuugcuaaaggaa uuca  ag    c
      |||||   |||||| || |||||||| ||||||||||||| ||||  ||    u
      gccuu   cucuuc CC UUUUGUUG GAACGAUUUUuuu aggu  uc    c
cucucu     -aa      u  A        A             g    uu  uuuu 

Annotation confidence Not enough data

Genome context

chr1: 83238914-83239030 [-]

Mature sly-miR6024

• Accession: MIMAT0023594
• Description: Solanum lycopersicum sly-miR6024 mature miRNA
• Sequence: 76 - UUUUAGCAAGAGUUGUUUUACC - 97
• Evidence: not_experimental

References

1. PubMed ID: 22307647
   MicroRNA regulation of plant innate immune receptors
   "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
   "Proc Natl Acad Sci U S A (2012) 109:1790-1795