Stem-loop nta-MIR482a

Accession

MI0020247

Description

Nicotiana tabacum nta-MIR482a precursor miRNA

Literature search

1 open access papers mention nta-MIR482a
(3 sentences)

Sequence

88772 reads, 6365.0 reads per million, 42 experiments

aguuuauccggaaaacuacgGGGAUUGGUGGGUUGGAAAGCUuuucacuucugauuaaacgcUUUCCAAUUCCACCCAUUCCUAugguuuuucaauaaucucuc
.........(((((((((.((((((.(((((((((((((((((((((....)))..))).))))))))).)))))).)))))).)))))))))...........

Structure

--aguuuaucc         c      U      -         -   --   c 
           ggaaaacua gGGGAU GGUGGG UUGGAAAGC Uuu  uca u
           ||||||||| |||||| |||||| ||||||||| |||  |||  
           cuuuuuggu UCCUUA CCACCU AACCUUUcg aaa  agu u
cucucuaauaa         A      C      U         c   uu   c 

Annotation confidence High

Genome context

Unknown

Mature nta-miR482a-5p

• Accession: MIMAT0058023
• Description: Nicotiana tabacum nta-miR482a-5p mature miRNA
• Sequence: 21 - GGGAUUGGUGGGUUGGAAAGCU - 42
• Evidence: experimental ; unknown

Mature nta-miR482a-3p

• Accession: MIMAT0023599
• Description: Nicotiana tabacum nta-miR482a-3p mature miRNA
• Sequence: 63 - UUUCCAAUUCCACCCAUUCCUA - 84
• Evidence: not_experimental

References

1. PubMed ID: 22307647
   MicroRNA regulation of plant innate immune receptors
   "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
   "Proc Natl Acad Sci U S A (2012) 109:1790-1795