miRBase entry: nta-MIR482a

Stem-loop nta-MIR482a


Accession
MI0020247
Description
Nicotiana tabacum nta-MIR482a precursor miRNA

Literature search
1 open access papers mention nta-MIR482a
(3 sentences)

Sequence

aguuuauccggaaaacuacggggauugguggguuggaaagcuuuucacuucugauuaaacgcUUUCCAAUUCCACCCAUUCCUAugguuuuucaauaaucucuc
.........(((((((((.((((((.(((((((((((((((((((((....)))..))).))))))))).)))))).)))))).)))))))))...........

Structure
--aguuuaucc         c      u      -         -   --   c 
           ggaaaacua ggggau gguggg uuggaaagc uuu  uca u
           ||||||||| |||||| |||||| ||||||||| |||  |||  
           cuuuuuggu UCCUUA CCACCU AACCUUUcg aaa  agu u
cucucuaauaa         A      C      U         c   uu   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR482a

Accession MIMAT0023599
Description Nicotiana tabacum nta-miR482a mature miRNA
Sequence 63 - UUUCCAAUUCCACCCAUUCCUA - 84
Evidence not_experimental

References

  1. PubMed ID: 22307647
    MicroRNA regulation of plant innate immune receptors
    "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
    "Proc Natl Acad Sci U S A (2012) 109:1790-1795