Stem-loop nta-MIR482b

Accession

MI0020252

Description

Nicotiana tabacum nta-MIR482b precursor miRNA

Literature search

1 open access papers mention nta-MIR482b
(3 sentences)

Sequence

26757 reads, 3294.0 reads per million, 41 experiments

guguuuaagggagcuuuuggAGUGGGUGGAGUGGUAAGAUAUcauauuuauguugaaucauaauaauugaaaUCUUGCCAAUGCCAUCCAUUCCUauggcuuccaaucauuucu
........(((((((...((((((((((((.(((((((((.(((...(((((......)))))....))).))))))))).).)))))))))))...)))))))..........

Structure

--guguuuaa       uuu           - G         A   -uau     uu 
          gggagcu   ggAGUGGGUGG A UGGUAAGAU Uca    uuaug  g
          |||||||   ||||||||||| | ||||||||| |||    |||||   
          ccuucgg   CCUUACCUACC U ACCGUUCUa agu    aauac  a
ucuuuacuaa       uaU           G A         a   uaau     ua 

Annotation confidence High

Genome context

Unknown

Mature nta-miR482b-5p

• Accession: MIMAT0023604
• Description: Nicotiana tabacum nta-miR482b-5p mature miRNA
• Sequence: 21 - AGUGGGUGGAGUGGUAAGAUAU - 42
• Evidence: experimental ; Illumina [2]

Mature nta-miR482b-3p

• Accession: MIMAT0023605
• Description: Nicotiana tabacum nta-miR482b-3p mature miRNA
• Sequence: 73 - UCUUGCCAAUGCCAUCCAUUCCU - 95
• Evidence: not_experimental

References

1. PubMed ID: 22307647
   MicroRNA regulation of plant innate immune receptors
   "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
   "Proc Natl Acad Sci U S A (2012) 109:1790-1795


2. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28