Stem-loop nta-MIR6025a

Accession

MI0020253

Description

Nicotiana tabacum nta-MIR6025a precursor miRNA

Sequence

uuuuuuacccgacccuggcaUACCAACAAUUGAGAUAACAUCuagguuugacgaucuuuuaaguaauuaucauacauccauucuugcacaaaaguauuguuguaccuggauguuaucucaguguuggcaugcauaaguuggguaagacaua
..(((((((((((....((((.((((((.((((((((((((((((((.((((((((((((..((((.................))))..))))).))))))).)))))))))))))))))))))))).))))....)))))))))))....

Structure

--uu           ccug    A      A                  u       -     aa    uuaucau 
    uuuuacccgac    gcaU CCAACA UUGAGAUAACAUCuaggu ugacgau cuuuu  guaa       a
    |||||||||||    |||| |||||| |||||||||||||||||| ||||||| |||||  ||||       c
    agaauggguug    cgua gguugu gacucuauuguaggucca guuguua gaaaa  cguu       a
auac           aaua    c      -                  u       u     ca    cuuaccu 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR6025a

• Accession: MIMAT0023606
• Description: Nicotiana tabacum nta-miR6025a mature miRNA
• Sequence: 21 - UACCAACAAUUGAGAUAACAUC - 42
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22307647
   MicroRNA regulation of plant innate immune receptors
   "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
   "Proc Natl Acad Sci U S A (2012) 109:1790-1795


2. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28